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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015805400.1_cds_XP_016493642.1_8374
CDS Infomation

[gene=LOC107812965] [db_xref=GeneID:107812965] [protein=serine/threonine-protein kinase RUNKEL-like] [partial=3'] [protein_id=XP_016493642.1] [location=complement(join(<4..1368,2324..2383,2477..2555,2647..2708,3265..3340,3477..3529,4762..4851,4934..4981))] [gbkey=CDS]
Sequence

ATGAATCAGTACCATATATACGAAGCTATAGGCCGTGGAAAGCACTCGACTGTTTATAAA
GGAAGAAAAAAGAAGACTATCGAGTATTTTGCAGTTAAGAGCGTGGATAAATCTCAGAAG
AACAAAGTTCTTCATGAAGTCAGAATTCTTCATTCTCTAGATCATGCAAATGTGTTGAAG
TTCTACTCCTGGTATGAAACGTCTGCGCACCTGTGGTTGGTTTTAGAATATTGTGTTGGA
GGAAATCTCATGAACTTGCTAGAGCAGGATGGTAAGCTTCCGGAAGATTCACTACATGAT
CTTGCTTGTGGCCTTGTTAGAGCTCTTCTATACTTACATTCAAAGGGAATAATTTACTGT
GACTTAAAACCATCAAACATTCTATTGGATGAAAATGGAATCACGAAGCTGTGTGATTTT
GGATTAGCAAGAAAATTGAGTGATATATCAAAGACACCTTCTTCCCAGTTGCCACAAATA
AAGCGAGGAACCCCCTGTTACATGGCTCCAGAGCTCTTTCAGGATGGAGGGGTCCATTCC
TATGCCTCTGATTTCTGGGCTCTTGGTTGTGTGTTGTTTGAATGCTATGCTGGGATACCT
CCTTTTGTTGGCAAAGAGTTTACCCAGTTAGTGAGATCAATCATTTCTGATCCAACTCCA
GAACTTCCTGGCACACCAAGCCGCCCCTTTATCAATCTGATTAACTCTCTTCTAATAAAA
GATCCTGCTGAAAGAATGCAGTGGCCCGAGCTAACTGGACATGCTATCTGGAAAACAAGA
TTTTCTGCAGTGCCTTTACCTCCTCAGCCTGCTTTTGATAATATGATAGAAGTTTCTTCT
AGATTATGCCTTTCAGAACGGAACAGTGACAAACCAATTCAAAACAAGACACCACAAAAG
ACTCGTGAAAAAGATTCAAAGGCATCCCTCAGGCAGGATGAAAATTCAAATACTGGATCT
AGAGGTCACGTGACACCAATCAAGGGCATATCCAGTGGCCGGAAAGCTCAAATGAAGGGT
TCTGGCAGGACAGTTGATGACAAGCAGAAAGACATCTCAAGCAATACTAAGGGTGTCAAT
CTATTACGTCTTTCAAGAATTGCAAAATCAAACTTAATGAGGGAAAATGAGAAGGAGAAC
TACCGCAGGCCATTGCCTAATAACTCTGAGAATGATGCTGAACTTAAGGTTGAAAATACT
GACATGGAACTTGATTTTAATGAGAATAATGAGGATGATACACAAGATGAAGCTGATGAA
ACTGACAGCACTCAATGTCCCGAGTCAACTACTTCAACTCCAAATCAGGCCGAGGGTCAT
GTGGAAGAGATGGATATTGACAGCAGACATCCAGATCCATCAGCTATGGTTAATACACCT
TTCTCAGATGATTCAAGGACATCTGACCATGAACCGACTTCTGAATACGAAGTGGCTGCT
ATGCTACCAAGTGATAGCCCTCAGCTAAAGACTCCTGCGATTAAAGGAAATCCCGGGAAT
GTCTCTGATATCTCAAAACCATCTAAGAACCTTTCAGATATTCTCTGGCATCCTTCTGAT
CTTTCAGTTAGACCCGTAATGCCTAGCAAAAAATCTGATAAAGGTTCAGATGCAATTCCT
TCACTTTCATTCGATGCACCTCAGGTATCTGATTTTGTCAAAATGTCAAAGGAGCAATTA
GACACTTTTAGTAGTAGGATCATCAGTATTGTTAGTGGGAATACTGCCTCTGGGGAGAAG
CAGAATGTGATCAGGTACCTTGAGCTTTTGACCAGCAATGCTGAGGCAGCCAACATCTTG
ACCAATGGACCTATTATGTTGGTTCTAGTCAAA

Peptide Sequence

PEP ID

XP_016493642.1
PEP Infomation

PREDICTED: serine/threonine-protein kinase RUNKEL-like, partial [Nicotiana tabacum]
Sequence

MNQYHIYEAIGRGKHSTVYKGRKKKTIEYFAVKSVDKSQKNKVLHEVRILHSLDHANVLK
FYSWYETSAHLWLVLEYCVGGNLMNLLEQDGKLPEDSLHDLACGLVRALLYLHSKGIIYC
DLKPSNILLDENGITKLCDFGLARKLSDISKTPSSQLPQIKRGTPCYMAPELFQDGGVHS
YASDFWALGCVLFECYAGIPPFVGKEFTQLVRSIISDPTPELPGTPSRPFINLINSLLIK
DPAERMQWPELTGHAIWKTRFSAVPLPPQPAFDNMIEVSSRLCLSERNSDKPIQNKTPQK
TREKDSKASLRQDENSNTGSRGHVTPIKGISSGRKAQMKGSGRTVDDKQKDISSNTKGVN
LLRLSRIAKSNLMRENEKENYRRPLPNNSENDAELKVENTDMELDFNENNEDDTQDEADE
TDSTQCPESTTSTPNQAEGHVEEMDIDSRHPDPSAMVNTPFSDDSRTSDHEPTSEYEVAA
MLPSDSPQLKTPAIKGNPGNVSDISKPSKNLSDILWHPSDLSVRPVMPSKKSDKGSDAIP
SLSFDAPQVSDFVKMSKEQLDTFSSRIISIVSGNTASGEKQNVIRYLELLTSNAEAANIL
TNGPIMLVLVK

Transcript Sequence

Gene sequence data has not been registered.